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ZDHHC11 zinc finger DHHC-type containing 11 [ Homo sapiens (human) ]

Gene ID: 79844, updated on 11-Sep-2019

Summary

Official Symbol
ZDHHC11provided by HGNC
Official Full Name
zinc finger DHHC-type containing 11provided by HGNC
Primary source
HGNC:HGNC:19158
See related
Ensembl:ENSG00000188818
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF399
Expression
Broad expression in lung (RPKM 2.8), duodenum (RPKM 2.5) and 24 other tissues See more
Orthologs

Genomic context

See ZDHHC11 in Genome Data Viewer
Location:
5p15.33
Exon count:
23
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (795605..863634, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (795720..859088, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type containing 11B Neighboring gene uncharacterized LOC101928768 Neighboring gene signal peptidase complex subunit 2 pseudogene 3 Neighboring gene bromodomain containing 9 Neighboring gene thyroid hormone receptor interactor 13

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ13153

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein-cysteine S-palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
peptidyl-L-cysteine S-palmitoylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein targeting to membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
probable palmitoyltransferase ZDHHC11
Names
DHHC-11
zinc finger DHHC domain-containing protein 11
zinc finger protein 399
zinc finger, DHHC domain containing 11
NP_079062.1
XP_016865358.1
XP_016865359.1
XP_016865360.1
XP_016865361.1
XP_016865362.1
XP_016865363.1
XP_016865364.1
XP_016865365.1
XP_016865366.1
XP_016865367.1
XP_024301976.1
XP_024301977.1
XP_024301978.1
XP_024301979.1
XP_024301980.1
XP_024301981.1
XP_024301982.1
XP_024301983.1
XP_024301984.1
XP_024301985.1
XP_024301986.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024786.2NP_079062.1  probable palmitoyltransferase ZDHHC11

    See identical proteins and their annotated locations for NP_079062.1

    Status: VALIDATED

    Source sequence(s)
    AK023215, AK024233, BC032000
    Consensus CDS
    CCDS3857.1
    UniProtKB/Swiss-Prot
    Q9H8X9
    Related
    ENSP00000283441.8, ENST00000283441.12
    Conserved Domains (1) summary
    pfam01529
    Location:120275
    zf-DHHC; DHHC palmitoyltransferase

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    795605..863634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017009871.1XP_016865360.1  probable palmitoyltransferase ZDHHC11 isoform X1

  2. XM_017009870.1XP_016865359.1  probable palmitoyltransferase ZDHHC11 isoform X1

  3. XM_024446212.1XP_024301980.1  probable palmitoyltransferase ZDHHC11 isoform X7

    Conserved Domains (1) summary
    pfam01529
    Location:120275
    zf-DHHC; DHHC palmitoyltransferase
  4. XM_017009872.1XP_016865361.1  probable palmitoyltransferase ZDHHC11 isoform X4

  5. XM_024446210.1XP_024301978.1  probable palmitoyltransferase ZDHHC11 isoform X5

    Conserved Domains (1) summary
    pfam01529
    Location:193330
    zf-DHHC; DHHC palmitoyltransferase
  6. XM_024446209.1XP_024301977.1  probable palmitoyltransferase ZDHHC11 isoform X3

    Conserved Domains (1) summary
    pfam01529
    Location:193316
    zf-DHHC; DHHC palmitoyltransferase
  7. XM_017009869.1XP_016865358.1  probable palmitoyltransferase ZDHHC11 isoform X1

  8. XM_017009878.1XP_016865367.1  probable palmitoyltransferase ZDHHC11 isoform X15

  9. XM_017009877.1XP_016865366.1  probable palmitoyltransferase ZDHHC11 isoform X13

  10. XM_017009876.2XP_016865365.1  probable palmitoyltransferase ZDHHC11 isoform X13

  11. XM_017009873.2XP_016865362.1  probable palmitoyltransferase ZDHHC11 isoform X12

  12. XM_017009875.2XP_016865364.1  probable palmitoyltransferase ZDHHC11 isoform X14

  13. XM_017009874.2XP_016865363.1  probable palmitoyltransferase ZDHHC11 isoform X13

  14. XM_024446208.1XP_024301976.1  probable palmitoyltransferase ZDHHC11 isoform X2

    Conserved Domains (1) summary
    pfam01529
    Location:193318
    zf-DHHC; DHHC palmitoyltransferase
  15. XM_024446211.1XP_024301979.1  probable palmitoyltransferase ZDHHC11 isoform X6

    Conserved Domains (1) summary
    pfam01529
    Location:193318
    zf-DHHC; DHHC palmitoyltransferase
  16. XM_024446216.1XP_024301984.1  probable palmitoyltransferase ZDHHC11 isoform X11

    Conserved Domains (1) summary
    pfam01529
    Location:193261
    zf-DHHC; DHHC palmitoyltransferase
  17. XM_024446213.1XP_024301981.1  probable palmitoyltransferase ZDHHC11 isoform X8

    Conserved Domains (1) summary
    pfam01529
    Location:193261
    zf-DHHC; DHHC palmitoyltransferase
  18. XM_024446214.1XP_024301982.1  probable palmitoyltransferase ZDHHC11 isoform X9

    Conserved Domains (1) summary
    pfam01529
    Location:193263
    zf-DHHC; DHHC palmitoyltransferase
  19. XM_024446215.1XP_024301983.1  probable palmitoyltransferase ZDHHC11 isoform X10

    Conserved Domains (1) summary
    pfam01529
    Location:193254
    zf-DHHC; DHHC palmitoyltransferase
  20. XM_024446218.1XP_024301986.1  probable palmitoyltransferase ZDHHC11 isoform X17

    Conserved Domains (1) summary
    cl19890
    Location:193245
    zf-DHHC; DHHC palmitoyltransferase
  21. XM_024446217.1XP_024301985.1  probable palmitoyltransferase ZDHHC11 isoform X16

    Conserved Domains (1) summary
    cl19890
    Location:193245
    zf-DHHC; DHHC palmitoyltransferase

RNA

  1. XR_002956179.1 RNA Sequence

  2. XR_002956181.1 RNA Sequence

  3. XR_002956180.1 RNA Sequence

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