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si:dkey-46g23.2 si:dkey-46g23.2 [ Danio rerio (zebrafish) ]

Gene ID: 793100, updated on 18-Sep-2024

Summary

Official Symbol
si:dkey-46g23.2provided by ZNC
Official Full Name
si:dkey-46g23.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-070705-476
See related
Ensembl:ENSDARG00000115817 AllianceGenome:ZFIN:ZDB-GENE-070705-476
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including COVID-19; background diabetic retinopathy; multiple sclerosis; neurodegenerative disease (multiple); and obstructive lung disease. Orthologous to several human genes including PZP (PZP alpha-2-macroglobulin like) and A2M (alpha-2-macroglobulin). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See si:dkey-46g23.2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (3386224..3398383, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (3603970..3616125, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184Bb, duplicate 1 Neighboring gene trinucleotide repeat containing adaptor 6Bb.1 Neighboring gene zgc:171446 Neighboring gene zgc:171445

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables peptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of peptidase activity IEA
Inferred from Electronic Annotation
more info
 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    3386224..3398383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068218497.1XP_068074598.1  alpha-2-macroglobulin

    Related
    ENSDARP00000047864.7, ENSDART00000047865.9