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PREBIDRAFT_RS06285 penicillin-binding protein [ Prevotella bivia DSM 20514 ]

Gene ID: 78530829, updated on 15-Apr-2023

Summary

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Gene symbol
PREBIDRAFT_RS06285
Gene description
penicillin-binding protein
Locus tag
PREBIDRAFT_RS06285
Gene type
protein coding
Organism
Prevotella bivia DSM 20514 (strain: DSM 20514, nat-host: Homo sapiens, culture-collection: DSM:20514, type-material: type strain of Prevotella bivia)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella
Old locus tag
PrebiDRAFT_0828
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Genomic context

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NZ_JH660660.1Genomic Context describing neighboring genes Neighboring gene division/cell wall cluster transcriptional repressor MraZ Neighboring gene FtsL-like putative cell division protein Neighboring gene 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH Neighboring gene UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Neighboring gene phospho-N-acetylmuramoyl-pentapeptide-transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JH660660.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Peptidoglycan biosynthesis and remodeling revisited. Shaku M, et al. Adv Appl Microbiol, 2020. PMID 32762868
  2. Penicillin binding protein 2a: An overview and a medicinal chemistry perspective. Shalaby MW, et al. Eur J Med Chem, 2020 Aug 1. PMID 32442851

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
penicillin-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JH660660.1 Reference assembly

    Range
    943871..946024
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004336847.1 penicillin-binding protein [Prevotella bivia]

    See identical proteins and their annotated locations for WP_004336847.1

    UniProtKB/TrEMBL
    A0A137SY18, I4Z8M4
    Conserved Domains (3) summary
    cd06575
    Location:664 → 717
    PASTA_Pbp2x-like_2; PASTA domain of PBP2x-like proteins, second repeat. Penicillin-binding proteins (PBPs) are the major targets for beta-lactam antibiotics, like penicillins and cephalosporins. Beta-lactam antibiotics specifically inhibit transpeptidase activity by ...
    COG0768
    Location:1 → 592
    FtsI; Cell division protein FtsI/penicillin-binding protein 2 [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]
    sd00037
    Location:664 → 716
    PASTA; PASTA domain [structural motif]
Nucleotide Protein
Heading Accession and Version