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TTHERM_00312010 ubiquitin carboxyl-terminal hydrolase [ Tetrahymena thermophila SB210 ]

Gene ID: 7844710, updated on 28-Dec-2023

Summary

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Gene symbol
TTHERM_00312010
Gene description
ubiquitin carboxyl-terminal hydrolase
Locus tag
TTHERM_00312010
Gene type
protein coding
RNA name
ubiquitin carboxyl-terminal hydrolase
RefSeq status
PROVISIONAL
Organism
Tetrahymena thermophila SB210 (strain: SB210)
Lineage
Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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Genomic context

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Exon count:
10

NW_002476212.1Genomic Context describing neighboring genes Neighboring gene kelch motif protein Neighboring gene membrane protease stomatin prohibitin family protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002476212.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ubiquitin carboxyl-terminal hydrolase
XP_001033384.2
  • encoded by transcript TTHERM_00312010A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002476212.1 Reference assembly

    Range
    35557..39058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001033384.3 → XP_001033384.2  ubiquitin carboxyl-terminal hydrolase [Tetrahymena thermophila SB210]

    See identical proteins and their annotated locations for XP_001033384.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q22KS8
    Conserved Domains (3) summary
    cl02553
    Location:373 → 683
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:370 → 683
    UCH; Ubiquitin carboxyl-terminal hydrolase
    pfam06337
    Location:288 → 357
    DUSP; DUSP domain
Nucleotide Protein
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