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nf-il2 transcription factor protein [ Ciona intestinalis (vase tunicate) ]

Gene ID: 778691, updated on 28-Oct-2019

Summary

Gene symbol
nf-il2
Gene description
transcription factor protein
See related
Ensembl:ENSCING00000008105
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona

Genomic context

See nf-il2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 5 NC_020170.2 (3518064..3521835, complement)

Chromosome 5 - NC_020170.2Genomic Context describing neighboring genes Neighboring gene tight junction protein ZO-2 Neighboring gene protein FAM166B Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 Neighboring gene SH3 and PX domain-containing protein 2A-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_020170.2 Chromosome 5 Reference KH Primary Assembly

General protein information

Preferred Names
transcription factor protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078303.1NP_001071771.1  transcription factor protein

    See identical proteins and their annotated locations for NP_001071771.1

    Status: PROVISIONAL

    Source sequence(s)
    AB210573
    UniProtKB/TrEMBL
    Q4H349
    Related
    ENSCINP00000016562, ENSCINT00000016562
    Conserved Domains (1) summary
    cd14694
    Location:1675
    bZIP_NFIL3; Basic leucine zipper (bZIP) domain of Nuclear factor interleukin-3-regulated protein (NFIL3): a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020170.2 Reference KH Primary Assembly

    Range
    3518064..3521835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018811826.2XP_018667371.1  transcription factor protein isoform X1

    UniProtKB/TrEMBL
    A0A1W5BAG6
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