U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BZIP50 bZIP transcription factor bZIP50 [ Glycine max (soybean) ]

Gene ID: 778128, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
BZIP50
Gene description
bZIP transcription factor bZIP50
Locus tag
GLYMA_06G284900v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
bZIP49
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (46937714..46941264, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (47340001..47343551, complement)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100788685 Neighboring gene uncharacterized LOC121175022 Neighboring gene protein MAIN-LIKE 2-like Neighboring gene ervatamin-B-like Neighboring gene uncharacterized LOC100306278

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Liao Y, et al. Planta, 2008 Jul. PMID 18365246

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
bZIP transcription factor bZIP50
Names
bZIP transcription factor bZIP49

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001348948.1 → NP_001335877.1  bZIP transcription factor bZIP50

    Status: VALIDATED

    Source sequence(s)
    ACUP04002322, BM954728
    UniProtKB/TrEMBL
    I1KEU6
    Conserved Domains (1) summary
    cd14703
    Location:207 → 257
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    46937714..46941264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001250048.1: Suppressed sequence

    Description
    NM_001250048.1: This RefSeq was removed because currently there is insufficient support for the transcript.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases