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SNX32 sorting nexin 32 [ Gallus gallus (chicken) ]

Gene ID: 771038, updated on 17-Aug-2024

Summary

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Symbol
SNX32provided by CGNC
Full Name
sorting nexin 32provided by CGNC
Primary source
CGNC:56458
See related
Ensembl:ENSGALG00010005890
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SNX6
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (35424006..35448078, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (35394271..35418994, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111051 Neighboring gene serine palmitoyltransferase small subunit A Neighboring gene E2F associated phosphoprotein Neighboring gene cofilin 2 Neighboring gene bromodomain adjacent to zinc finger domain 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-6
Names
sorting nexin 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079757.2 → NP_001073225.1  sorting nexin-6

    See identical proteins and their annotated locations for NP_001073225.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000215
    UniProtKB/TrEMBL
    A0A1D5PIJ7, A0A8V0XJG7, F1NFW0, Q5ZK22
    Related
    ENSGALP00010008313.1, ENSGALT00010014110.1
    Conserved Domains (2) summary
    cd07292
    Location:30 → 170
    PX_SNX6; The phosphoinositide binding Phox Homology domain of Sorting Nexin 6
    cd07662
    Location:186 → 403
    BAR_SNX6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    35424006..35448078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015287566.4 → XP_015143052.1  sorting nexin-6 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XJG7, A0A8V0XTK5
    Related
    ENSGALP00010008321.1, ENSGALT00010014126.1
    Conserved Domains (2) summary
    cd07292
    Location:31 → 171
    PX_SNX6; The phosphoinositide binding Phox Homology domain of Sorting Nexin 6
    cd07662
    Location:187 → 404
    BAR_SNX6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    35394271..35418994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918908.1 → XP_046774864.1  sorting nexin-6 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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