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4930447F24Rik RIKEN cDNA 4930447F24 gene [ Mus musculus (house mouse) ]

Gene ID: 76873, updated on 8-Feb-2024

Summary

Official Symbol
4930447F24Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930447F24 geneprovided by MGI
Primary source
MGI:MGI:1924123
See related
Ensembl:ENSMUSG00000102224 AllianceGenome:MGI:1924123
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in cerebellum adult (RPKM 3.8), colon adult (RPKM 2.9) and 8 other tissues See more
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Genomic context

See 4930447F24Rik in Genome Data Viewer
Location:
9; 9 F1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (108010917..108015766)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (108133718..108138567)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene microRNA 7088 Neighboring gene STARR-positive B cell enhancer ABC_E2914 Neighboring gene macrophage stimulating 1 (hepatocyte growth factor-like) Neighboring gene acylpeptide hydrolase Neighboring gene bassoon Neighboring gene glycine cleavage system protein H (aminomethyl carrier) pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E2306 Neighboring gene STARR-positive B cell enhancer ABC_E6804 Neighboring gene dystroglycan 1 Neighboring gene STARR-positive B cell enhancer ABC_E8316

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126077.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC137678, AK015404, BQ031555
    Related
    ENSMUST00000194140.2
  2. NR_126078.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate 5' terminal exon resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC137678, AK015404, BQ031555

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    108010917..108015766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)