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Foxl2os forkhead box L2, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 768252, updated on 2-Nov-2024

Summary

Official Symbol
Foxl2osprovided by MGI
Official Full Name
forkhead box L2, opposite strandprovided by MGI
Primary source
MGI:MGI:3614944
See related
Ensembl:ENSMUSG00000097072 AllianceGenome:MGI:3614944
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in follicle cell of primordial follicle and ovary. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in ovary adult (RPKM 23.6), subcutaneous fat pad adult (RPKM 8.1) and 2 other tissues See more
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Genomic context

See Foxl2os in Genome Data Viewer
Location:
9 E3.3; 9 51.41 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (98831208..98837363, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (98949155..98955310, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33778 Neighboring gene translationally-controlled tumor protein pseudogene Neighboring gene forkhead box L2 Neighboring gene STARR-positive B cell enhancer mm9_chr9:98886571-98886872 Neighboring gene Fas apoptotic inhibitory molecule

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Other Names

  • forkhead box L2 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003248.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC120148, AK143359
    Related
    ENSMUST00000181706.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    98831208..98837363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)