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ZFPL1 zinc finger protein like 1 [ Homo sapiens (human) ]

Gene ID: 7542, updated on 18-Aug-2020

Summary

Official Symbol
ZFPL1provided by HGNC
Official Full Name
zinc finger protein like 1provided by HGNC
Primary source
HGNC:HGNC:12868
See related
Ensembl:ENSG00000162300
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MCG4; D11S750
Expression
Ubiquitous expression in testis (RPKM 12.5), ovary (RPKM 11.1) and 25 other tissues See more
Orthologs

Genomic context

See ZFPL1 in Genome Data Viewer
Location:
11q13.1
Exon count:
8
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (65084222..65088398)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (64851694..64855874)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene SAC3 domain containing 1 Neighboring gene N-acetylated alpha-linked acidic dipeptidase like 1 Neighboring gene cell division cycle associated 5 Neighboring gene transmembrane protein 262 Neighboring gene VPS51 subunit of GARP complex Neighboring gene transmembrane 7 superfamily member 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding NAS
Non-traceable Author Statement
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
zinc ion binding NAS
Non-traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription, DNA-templated NAS
Non-traceable Author Statement
more info
PubMed 
vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Golgi apparatus IDA
Inferred from Direct Assay
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nucleus NAS
Non-traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
zinc finger protein-like 1
Names
zinc finger protein MCG4
zinc-finger protein in MEN1 region

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_006782.4NP_006773.2  zinc finger protein-like 1

    See identical proteins and their annotated locations for NP_006773.2

    Status: VALIDATED

    Source sequence(s)
    AF030291, AI207587, AU279924
    Consensus CDS
    CCDS8092.1
    UniProtKB/Swiss-Prot
    O95159
    UniProtKB/TrEMBL
    A0A024R576
    Related
    ENSP00000294258.3, ENST00000294258.8
    Conserved Domains (1) summary
    cd16487
    Location:50104
    mRING-H2-C3DHC3_ZFPL1; Modified RING finger, H2 subclass (C3DHC3-type), found in zinc finger protein-like 1 (ZFPL1) and similar proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    65084222..65088398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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