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LOC7488741 ran-binding protein 1 homolog c [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7488741, updated on 3-Apr-2024

Summary

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Gene symbol
LOC7488741
Gene description
ran-binding protein 1 homolog c
Locus tag
POPTR_016G119800v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 16 NC_037300.2 (12468706..12471906)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 16 NC_037300.1 (12462771..12466111)

Chromosome 16 - NC_037300.2Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At2g30780 Neighboring gene ERBB-3 BINDING PROTEIN 1 Neighboring gene uncharacterized LOC7460368 Neighboring gene dnaJ protein ERDJ3A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleocytoplasmic transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ran-binding protein 1 homolog c

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037300.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    12468706..12471906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024587705.2 → XP_024443473.2  ran-binding protein 1 homolog c

    UniProtKB/TrEMBL
    A9P8D0
Nucleotide Protein
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Gene LinkOut

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