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A730049H05Rik RIKEN cDNA A730049H05 gene [ Mus musculus (house mouse) ]

Gene ID: 74516, updated on 8-Feb-2024

Summary

Official Symbol
A730049H05Rikprovided by MGI
Official Full Name
RIKEN cDNA A730049H05 geneprovided by MGI
Primary source
MGI:MGI:1921766
See related
Ensembl:ENSMUSG00000048636 AllianceGenome:MGI:1921766
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
8430417A20Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

See A730049H05Rik in Genome Data Viewer
Location:
6 D1; 6 41.54 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (92793424..92820449)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (92816443..92843468)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene prickle planar cell polarity protein 2 Neighboring gene STARR-seq mESC enhancer starr_16669 Neighboring gene RNA binding motif protein 17 pseudogene Neighboring gene STARR-seq mESC enhancer starr_16670 Neighboring gene STARR-seq mESC enhancer starr_16671 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 9 Neighboring gene predicted gene, 52913 Neighboring gene STARR-seq mESC enhancer starr_16672 Neighboring gene STARR-seq mESC enhancer starr_16673 Neighboring gene predicted gene 15737 Neighboring gene RIKEN cDNA 9530026P05 gene Neighboring gene STARR-seq mESC enhancer starr_16674

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_169152.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC110378
    Related
    ENSMUST00000057977.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    92793424..92820449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_175209.2: Suppressed sequence

    Description
    NM_175209.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.