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Hyal5 hyaluronoglucosaminidase 5 [ Mus musculus (house mouse) ]

Gene ID: 74468, updated on 23-Jun-2021

Summary

Official Symbol
Hyal5provided by MGI
Official Full Name
hyaluronoglucosaminidase 5provided by MGI
Primary source
MGI:MGI:1921718
See related
Ensembl:ENSMUSG00000029678
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933439A12Rik
Expression
Restricted expression toward testis adult (RPKM 24.7) See more
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Genomic context

See Hyal5 in Genome Data Viewer
Location:
6; 6 A3.1
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (24857936..24891958)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (24857937..24891959)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (24807997..24841958)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene sperm adhesion molecule 1 Neighboring gene sperm adhesion molecule 1 pseudogene Neighboring gene predicted gene, 22267 Neighboring gene transmembrane protein 229A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables hyalurononglucosaminidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables hyalurononglucosaminidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in acrosomal vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in acrosomal vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in anchored component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytoplasmic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
hyaluronidase-5
Names
hyal-5
hyaluronidase Hyal-5
hyaluronidase PH-20
NP_083233.1
XP_006505250.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028957.2NP_083233.1  hyaluronidase-5 precursor

    See identical proteins and their annotated locations for NP_083233.1

    Status: PROVISIONAL

    Source sequence(s)
    AK133387
    Consensus CDS
    CCDS19948.1
    UniProtKB/Swiss-Prot
    Q812F3
    Related
    ENSMUSP00000144011.2, ENSMUST00000200968.4
    Conserved Domains (1) summary
    pfam01630
    Location:42369
    Glyco_hydro_56; Hyaluronidase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    24857936..24891958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006505187.2XP_006505250.1  hyaluronidase-5 isoform X1

    See identical proteins and their annotated locations for XP_006505250.1

    UniProtKB/Swiss-Prot
    Q812F3
    Related
    ENSMUSP00000031689.6, ENSMUST00000031689.6
    Conserved Domains (1) summary
    pfam01630
    Location:42369
    Glyco_hydro_56; Hyaluronidase
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