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4931414P19Rik RIKEN cDNA 4931414P19 gene [ Mus musculus (house mouse) ]

Gene ID: 74359, updated on 5-Mar-2024

Summary

Official Symbol
4931414P19Rikprovided by MGI
Official Full Name
RIKEN cDNA 4931414P19 geneprovided by MGI
Primary source
MGI:MGI:1921609
See related
Ensembl:ENSMUSG00000022179 AllianceGenome:MGI:1921609
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rtfc
Summary
Acts upstream of or within anatomical structure development; cell differentiation; and positive regulation of gene expression. Predicted to be located in extracellular region. Orthologous to human C14orf93 (chromosome 14 open reading frame 93). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 1.6), limb E14.5 (RPKM 1.4) and 28 other tissues See more
Orthologs
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Genomic context

Location:
14 C2; 14 27.85 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (54821119..54843450, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (54583662..54606099, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_36740 Neighboring gene ajuba LIM protein Neighboring gene STARR-seq mESC enhancer starr_36741 Neighboring gene STARR-positive B cell enhancer ABC_E7313 Neighboring gene U6 small nuclear RNA, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_36743 Neighboring gene STARR-positive B cell enhancer ABC_E7314 Neighboring gene STARR-positive B cell enhancer mm9_chr14:55236824-55237125 Neighboring gene proteasome (prosome, macropain) subunit, beta type 5 Neighboring gene microRNA 686 Neighboring gene proteasome (prosome, macropain) subunit, beta type, 11

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General protein information

Preferred Names
uncharacterized protein C14orf93 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028890.2NP_083166.1  uncharacterized protein C14orf93 homolog precursor

    See identical proteins and their annotated locations for NP_083166.1

    Status: PROVISIONAL

    Source sequence(s)
    CT009512
    Consensus CDS
    CCDS27094.1
    UniProtKB/Swiss-Prot
    Q8K2W9
    Related
    ENSMUSP00000022786.5, ENSMUST00000022786.6
    Conserved Domains (1) summary
    pfam15394
    Location:2538
    DUF4616; Domain of unknown function (DUF4616)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    54821119..54843450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158880.1XP_036014773.1  uncharacterized protein C14orf93 homolog isoform X2

    Conserved Domains (1) summary
    pfam15394
    Location:2432
    DUF4616; Domain of unknown function (DUF4616)
  2. XM_006519618.5XP_006519681.1  uncharacterized protein C14orf93 homolog isoform X1

    See identical proteins and their annotated locations for XP_006519681.1

    UniProtKB/Swiss-Prot
    Q8K2W9
    Conserved Domains (1) summary
    pfam15394
    Location:2538
    DUF4616; Domain of unknown function (DUF4616)
  3. XM_036158879.1XP_036014772.1  uncharacterized protein C14orf93 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q8K2W9
    Conserved Domains (1) summary
    pfam15394
    Location:2538
    DUF4616; Domain of unknown function (DUF4616)
  4. XM_011245210.4XP_011243512.1  uncharacterized protein C14orf93 homolog isoform X1

    See identical proteins and their annotated locations for XP_011243512.1

    UniProtKB/Swiss-Prot
    Q8K2W9
    Conserved Domains (1) summary
    pfam15394
    Location:2538
    DUF4616; Domain of unknown function (DUF4616)
  5. XM_006519620.5XP_006519683.1  uncharacterized protein C14orf93 homolog isoform X1

    See identical proteins and their annotated locations for XP_006519683.1

    UniProtKB/Swiss-Prot
    Q8K2W9
    Conserved Domains (1) summary
    pfam15394
    Location:2538
    DUF4616; Domain of unknown function (DUF4616)