U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNHG9 small nucleolar RNA host gene 9 [ Homo sapiens (human) ]

Gene ID: 735301, updated on 23-Oct-2022

Summary

Official Symbol
SNHG9provided by HGNC
Official Full Name
small nucleolar RNA host gene 9provided by HGNC
Primary source
HGNC:HGNC:33102
See related
AllianceGenome:HGNC:33102
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00062
Expression
Ubiquitous expression in bone marrow (RPKM 9.9), salivary gland (RPKM 6.8) and 23 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SNHG9 in Genome Data Viewer
Location:
16p13.3
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (1964996..1965504)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (1984955..1985463)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (2014997..2015505)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, H/ACA box 10 Neighboring gene ribosomal protein S2 Neighboring gene small nucleolar RNA, H/ACA box 64 Neighboring gene small nucleolar RNA, H/ACA box 78 Neighboring gene ring finger protein 151 Neighboring gene transducin beta like 3 Neighboring gene NADPH oxidase organizer 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • small nucleolar RNA host gene (non-protein coding) 9
  • small nucleolar RNA host gene 9 (non-protein coding)

Clone Names

  • DKFZp686N06141

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003142.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    CR749453

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    1964996..1965504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791799.1 Reference GRCh38.p14 PATCHES

    Range
    31144..31652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    1984955..1985463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)