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BTG2-DT BTG2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 730227, updated on 13-May-2022

Summary

Official Symbol
BTG2-DTprovided by HGNC
Official Full Name
BTG2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:49452
See related
Ensembl:ENSG00000233791 AllianceGenome:HGNC:49452
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC01136
Expression
Low expression observed in reference dataset See more
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Genomic context

See BTG2-DT in Genome Data Viewer
Location:
1q32.1
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (203298758..203305325, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (202561593..202568174, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (203267886..203274453, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904486 Neighboring gene Sharpr-MPRA regulatory region 10055 Neighboring gene long intergenic non-protein coding RNA 1353 Neighboring gene BTG anti-proliferation factor 2 Neighboring gene CRISPRi-validated cis-regulatory element chr1.10869

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034150.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks and exon and is shorter, compared to variant 1.
    Source sequence(s)
    AK024293, AL513326, DA707241
    Related
    ENST00000457348.5
  2. NR_034151.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AK024293, AK309664, AL513326, DA707241

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    203298758..203305325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    202561593..202568174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)