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PAPOLA-DT PAPOLA divergent transcript [ Homo sapiens (human) ]

Gene ID: 730202, updated on 10-Oct-2023

Summary

Official Symbol
PAPOLA-DTprovided by HGNC
Official Full Name
PAPOLA divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55380
See related
AllianceGenome:HGNC:55380
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See PAPOLA-DT in Genome Data Viewer
Location:
14q32.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (96501648..96502326, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (90733251..90733929, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (96967985..96968663, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene adenylate kinase 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8986 Neighboring gene phosphatidylethanolamine binding protein 1 pseudogene 1 Neighboring gene ribosomal protein L23a pseudogene 10 Neighboring gene MPRA-validated peak2245 silencer Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:96967424-96968020 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:96968021-96968615 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:96968616-96969211 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:96970367-96970868 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:96970869-96971368 Neighboring gene poly(A) polymerase alpha Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6056 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8988 Neighboring gene RN7SK pseudogene 108

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_122121.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL163051, BC036922

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    96501648..96502326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    90733251..90733929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)