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ENTPD1-AS1 ENTPD1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 728558, updated on 25-Jan-2022

Summary

Official Symbol
ENTPD1-AS1provided by HGNC
Official Full Name
ENTPD1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:45203
See related
Ensembl:ENSG00000226688 AllianceGenome:HGNC:45203
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in small intestine (RPKM 2.3), fat (RPKM 2.0) and 23 other tissues See more
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Genomic context

See ENTPD1-AS1 in Genome Data Viewer
Location:
10q24.1
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (95753206..96090235, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (97512963..97849992, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 3716 Neighboring gene aldehyde dehydrogenase 18 family member A1 Neighboring gene tectonic family member 3 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 1 Neighboring gene coiled-coil and C2 domain containing 2B Neighboring gene ribosomal protein L21 pseudogene 90 Neighboring gene microRNA 3157 Neighboring gene cyclin J Neighboring gene RNA, U6 small nuclear 271, pseudogene Neighboring gene zinc finger protein 518A Neighboring gene nucleophosmin 1 pseudogene 25 Neighboring gene B cell linker

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • weakly similar to zinc finger protein 195

Clone Names

  • FLJ34077, FLJ39150, MGC10764

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038444.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AK091396, AL365273, BU852745
    Related
    ENST00000416301.5
  2. NR_134320.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks four 3' exons but contains alternate 3' exon structure, compared to variant 1.
    Source sequence(s)
    AI571323, BC028619, BU852745, DA419635
  3. NR_134321.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks four 3' exons but contains alternate 3' exon structure, compared to variant 1.
    Source sequence(s)
    AI571323, BC028619, BU852745, DA419635
    Related
    ENST00000691417.1
  4. NR_134322.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks four 3' exons but contains alternate 3' exon structure, compared to variant 1.
    Source sequence(s)
    AI571323, AL120918, BC028619, BU852745, DA419635

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    95753206..96090235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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