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DNLZ DNL-type zinc finger [ Homo sapiens (human) ]

Gene ID: 728489, updated on 13-Mar-2020

Summary

Official Symbol
DNLZprovided by HGNC
Official Full Name
DNL-type zinc fingerprovided by HGNC
Primary source
HGNC:HGNC:33879
See related
Ensembl:ENSG00000213221
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HEP; HEP1; ZIM17; TIMM15; C9orf151; bA413M3.2
Expression
Ubiquitous expression in kidney (RPKM 6.4), spleen (RPKM 4.8) and 25 other tissues See more
Orthologs

Genomic context

See DNLZ in Genome Data Viewer
Location:
9q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (136359483..136363744, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (139256352..139268111, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene 9q34.3 QSOX2 distal recombination region Neighboring gene coiled-coil domain containing 187 Neighboring gene uncharacterized LOC26102 Neighboring gene G protein signaling modulator 1 Neighboring gene Sharpr-MPRA regulatory region 3996 Neighboring gene caspase recruitment domain family member 9 Neighboring gene small nuclear RNA activating complex polypeptide 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Potential readthrough

Included gene: CARD9

Homology

Clone Names

  • MGC87491

Gene Ontology Provided by GOA

Function Evidence Code Pubs
chaperone binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
protein folding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein import into mitochondrial matrix IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein stabilization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
DNL-type zinc finger protein
Names
HSP70 escort protein
RP11-413M3.2
hsp70-escort protein 1
mtHsp70-escort protein
translocase of inner mitochondrial membrane 15 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080849.3NP_001074318.1  DNL-type zinc finger protein

    See identical proteins and their annotated locations for NP_001074318.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the a protein.
    Source sequence(s)
    AI435052, AI696701, AL592301, BC146915
    Consensus CDS
    CCDS35179.1
    UniProtKB/Swiss-Prot
    Q5SXM8
    Related
    ENSP00000360803.3, ENST00000371738.4
    Conserved Domains (1) summary
    pfam05180
    Location:70135
    zf-DNL; DNL zinc finger

RNA

  1. NR_073565.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate 5' splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AI435052, AI696701, AL592301, BC146924, BC171835

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    136359483..136363744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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