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LINC00163 long intergenic non-protein coding RNA 163 [ Homo sapiens (human) ]

Gene ID: 727699, updated on 13-May-2022

Summary

Official Symbol
LINC00163provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 163provided by HGNC
Primary source
HGNC:HGNC:33165
See related
Ensembl:ENSG00000234880 MIM:610259; AllianceGenome:HGNC:33165
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NLC1A; NLC1-A; C21orf134; NCRNA00163
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00163 in Genome Data Viewer
Location:
21q22.3
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (44989864..44994086, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (43351643..43356283, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (46409779..46414001, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1547 Neighboring gene SLX9 ribosome biogenesis factor Neighboring gene FAM207A intron CAGE-defined mid-level expression enhancer Neighboring gene long intergenic non-protein coding RNA 165 Neighboring gene P38 inhibited cutaneous squamous cell carcinoma associated lincRNA

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • narcolepsy candidate region gene 1A
  • narcolepsy candidate-region 1 gene A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033840.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP001505
    Related
    ENST00000434081.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    44989864..44994086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    43351643..43356283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)