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5530401A14Rik RIKEN cDNA 5530401A14 gene [ Mus musculus (house mouse) ]

Gene ID: 71388, updated on 8-Feb-2024


Official Symbol
5530401A14Rikprovided by MGI
Official Full Name
RIKEN cDNA 5530401A14 geneprovided by MGI
Primary source
See related
Ensembl:ENSMUSG00000020703 AllianceGenome:MGI:1918638
Gene type
RefSeq status
Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Low expression observed in reference dataset See more
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Genomic context

See 5530401A14Rik in Genome Data Viewer
11 B5; 11 49.61 cM
Exon count:
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (81751503..81785408)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (81860677..81894582)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene acid-sensing ion channel 2 Neighboring gene RIKEN cDNA 1700071K01 gene Neighboring gene predicted gene 11418 Neighboring gene STARR-seq mESC enhancer starr_30167 Neighboring gene STARR-seq mESC enhancer starr_30168 Neighboring gene STARR-seq mESC enhancer starr_30169 Neighboring gene predicted gene, 46254 Neighboring gene STARR-seq mESC enhancer starr_30170 Neighboring gene predicted gene 11419 Neighboring gene predicted gene, 31522 Neighboring gene C-C motif chemokine ligand 2

Genomic regions, transcripts, and products


  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information


Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.


  1. NR_038010.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK017430, AL626807, BB613856

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J


  1. NC_000077.7 Reference GRCm39 C57BL/6J

    GenBank, FASTA, Sequence Viewer (Graphics)