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Stamos signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 70957, updated on 8-Feb-2024

Summary

Official Symbol
Stamosprovided by MGI
Official Full Name
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strandprovided by MGI
Primary source
MGI:MGI:1918207
See related
AllianceGenome:MGI:1918207
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4921530L18Rik
Expression
Biased expression in testis adult (RPKM 14.7), genital fat pad adult (RPKM 1.2) and 5 other tissues See more
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Genomic context

See Stamos in Genome Data Viewer
Location:
2 A2; 2 10.36 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (14075144..14078745, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (14070333..14073934, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 Neighboring gene STARR-seq mESC enhancer starr_03712 Neighboring gene STARR-seq mESC enhancer starr_03715 Neighboring gene STARR-positive B cell enhancer ABC_E3359 Neighboring gene STARR-positive B cell enhancer ABC_E10082 Neighboring gene STARR-positive B cell enhancer ABC_E7793 Neighboring gene STARR-seq mESC enhancer starr_03717 Neighboring gene STARR-seq mESC enhancer starr_03718 Neighboring gene STARR-seq mESC enhancer starr_03719 Neighboring gene STARR-seq mESC enhancer starr_03720 Neighboring gene STARR-seq mESC enhancer starr_03721 Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene STARR-seq mESC enhancer starr_03722 Neighboring gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 Neighboring gene STARR-seq mESC enhancer starr_03726 Neighboring gene transmembrane protein 236

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Stam opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038162.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK014986, AL844560

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    14075144..14078745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)