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Gemin7 gem nuclear organelle associated protein 7 [ Mus musculus (house mouse) ]

Gene ID: 69731, updated on 26-Sep-2022

Summary

Official Symbol
Gemin7provided by MGI
Official Full Name
gem nuclear organelle associated protein 7provided by MGI
Primary source
MGI:MGI:1916981
See related
Ensembl:ENSMUSG00000044709 AllianceGenome:MGI:1916981
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2400008I04Rik
Summary
Predicted to be involved in spliceosomal snRNP assembly. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in Gemini of coiled bodies and cytosol. Predicted to be part of SMN complex. Orthologous to human GEMIN7 (gem nuclear organelle associated protein 7). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in ovary adult (RPKM 103.2), adrenal adult (RPKM 98.4) and 28 other tissues See more
Orthologs
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Genomic context

See Gemin7 in Genome Data Viewer
Location:
7; 7 A3
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (19298874..19307268, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (19564949..19573343, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene NTPase, KAP family P-loop domain containing 1 Neighboring gene protein phosphatase 1, regulatory subunit 37 Neighboring gene zinc finger protein 296 Neighboring gene CLK4-associating serine/arginine rich protein

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within RNA splicing IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within mRNA processing IEA
Inferred from Electronic Annotation
more info
 
involved_in spliceosomal snRNP assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in spliceosomal snRNP assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in Gemini of coiled bodies ISO
Inferred from Sequence Orthology
more info
 
part_of SMN complex ISO
Inferred from Sequence Orthology
more info
 
part_of SMN-Sm protein complex ISO
Inferred from Sequence Orthology
more info
 
part_of Sm-like protein family complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear body ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
gem-associated protein 7
Names
gemin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027189.2NP_081465.1  gem-associated protein 7

    See identical proteins and their annotated locations for NP_081465.1

    Status: PROVISIONAL

    Source sequence(s)
    AK010303
    Consensus CDS
    CCDS20907.1
    UniProtKB/Swiss-Prot
    Q9CWY4
    UniProtKB/TrEMBL
    A0A6P5Q2V9, A0A8C6GJP5
    Related
    ENSMUSP00000055844.4, ENSMUST00000051364.4
    Conserved Domains (1) summary
    cd11677
    Location:52128
    Gemin7; Gemin 7

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    19298874..19307268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)