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Spaca4 sperm acrosome associated 4 [ Mus musculus (house mouse) ]

Gene ID: 69363, updated on 5-Mar-2024

Summary

Official Symbol
Spaca4provided by MGI
Official Full Name
sperm acrosome associated 4provided by MGI
Primary source
MGI:MGI:1916613
See related
Ensembl:ENSMUSG00000070563 AllianceGenome:MGI:1916613
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Samp14; 1700008E09Rik
Summary
Predicted to act upstream of or within cell adhesion. Predicted to be located in cytoplasmic vesicle and plasma membrane. Predicted to be anchored component of membrane. Orthologous to human SPACA4 (sperm acrosome associated 4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Spaca4 in Genome Data Viewer
Location:
7 B3; 7 29.46 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (45374531..45375240, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45725107..45725816, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene D site albumin promoter binding protein Neighboring gene STARR-positive B cell enhancer ABC_E6545 Neighboring gene sphingosine kinase 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52973256-52973443 Neighboring gene ribosomal protein L18 Neighboring gene family with sequence similarity 83, member E Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52988906-52989102 Neighboring gene sulfotransferase family, cytosolic, 2B, member 1 Neighboring gene predicted gene, 31597 Neighboring gene STARR-seq mESC enhancer starr_18855 Neighboring gene predicted gene, 39009

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in sperm-egg recognition IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
sperm acrosome membrane-associated protein 4
Names
sperm acrosomal membrane 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027055.3NP_081331.2  sperm acrosome membrane-associated protein 4 precursor

    See identical proteins and their annotated locations for NP_081331.2

    Status: VALIDATED

    Source sequence(s)
    AC167242
    Consensus CDS
    CCDS21262.1
    UniProtKB/Swiss-Prot
    Q80ZQ0, Q9DAK7
    Related
    ENSMUSP00000091991.4, ENSMUST00000094424.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    45374531..45375240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)