U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6903086 malonate--CoA ligase ACSF3, mitochondrial [ Drosophila pseudoobscura ]

Gene ID: 6903086, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC6903086
Gene description
malonate--CoA ligase ACSF3, mitochondrial
See related
EnsemblRapid:LOC6903086
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC6903086 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 4 NC_046681.1 (25484740..25487131)

Chromosome 4 - NC_046681.1Genomic Context describing neighboring genes Neighboring gene Hormone receptor-like in 38 Neighboring gene uncharacterized LOC6903085 Neighboring gene uncharacterized LOC4816866 Neighboring gene I-kappaB kinase epsilon Neighboring gene uncharacterized LOC6903087

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_046681.1 Chromosome 4 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
malonate--CoA ligase ACSF3, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046681.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    25484740..25487131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033379960.1 → XP_033235851.1  malonate--CoA ligase ACSF3, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6I8VXP0
    Related
    XP_033235851.1, XM_033379960.1
    Conserved Domains (1) summary
    cl17068
    Location:63 → 449
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_002132768.3 → XP_002132804.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_002132804.1

    UniProtKB/TrEMBL
    A0A6I8UYD7, B5DIR4
    Related
    XP_002132804.1, XM_002132768.3
    Conserved Domains (2) summary
    COG0318
    Location:58 → 607
    CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
    cl17068
    Location:63 → 610
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials