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Krtap2-1 keratin associated protein 2-1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680152, updated on 17-Aug-2024

Summary

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Symbol
Krtap2-1provided by RGD
Full Name
keratin associated protein 2-1provided by RGD
Primary source
RGD:1561281
See related
EnsemblRapid:ENSRNOG00000071951 AllianceGenome:RGD:1561281
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Krtap2; RGD1561281
Summary
Predicted to be located in keratin filament. Orthologous to human KRTAP2-1 (keratin associated protein 2-1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
10q31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (85068302..85068694, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (84572164..84572587, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (87529181..87529727, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene keratin associated protein 1-5 like 1 Neighboring gene keratin associated protein 2-4-like 1 Neighboring gene keratin associated protein 2-4 Neighboring gene keratin associated protein 2-4 like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
keratin-associated protein 2-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    85068302..85068694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001055917.6 → XP_001055917.1  keratin-associated protein 2-1

    See identical proteins and their annotated locations for XP_001055917.1

    UniProtKB/TrEMBL
    D3ZBD2
    Related
    ENSRNOP00000112619.1, ENSRNOT00000132223.1
    Conserved Domains (1) summary
    pfam01500
    Location:32 → 130
    Keratin_B2; Keratin, high sulfur B2 protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases
Research Materials
Miscellaneous