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Sdhd succinate dehydrogenase complex, subunit D, integral membrane protein [ Mus musculus (house mouse) ]

Gene ID: 66925, updated on 22-Apr-2017
Official Symbol
Sdhdprovided by MGI
Official Full Name
succinate dehydrogenase complex, subunit D, integral membrane proteinprovided by MGI
Primary source
MGI:MGI:1914175
See related
Ensembl:ENSMUSG00000000171 Vega:OTTMUSG00000063072
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C78570; AVLL5809; PRO19626; 3110001M13Rik
Orthologs
Location:
9; 9 A5.3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (50596340..50603849, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (50404445..50411954, complement)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene beta-carotene oxygenase 2 Neighboring gene interleukin 18 Neighboring gene testis expressed gene 12 Neighboring gene expressed sequence AU019823 Neighboring gene translocase of inner mitochondrial membrane 8B Neighboring gene PIH1 domain containing 2

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
heme binding IBA
Inferred from Biological aspect of Ancestor
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to succinate dehydrogenase (ubiquinone) activity IBA
Inferred from Biological aspect of Ancestor
more info
 
succinate dehydrogenase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
succinate dehydrogenase activity ISO
Inferred from Sequence Orthology
more info
 
ubiquinone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
cellular response to hypoxia IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrial electron transport, succinate to ubiquinone IBA
Inferred from Biological aspect of Ancestor
more info
 
oxidation-reduction process IEA
Inferred from Electronic Annotation
more info
 
regulation of catecholamine secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
tricarboxylic acid cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
tricarboxylic acid cycle ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 
mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IBA
Inferred from Biological aspect of Ancestor
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IMP
Inferred from Mutant Phenotype
more info
PubMed 
Preferred Names
succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial
Names
CII-4
QPs3
cybS
succinate dehydrogenase complex subunit D
succinate-ubiquinone oxidoreductase cytochrome b small subunit
succinate-ubiquinone reductase membrane anchor subunit

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025848.3NP_080124.1  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

    See identical proteins and their annotated locations for NP_080124.1

    Status: VALIDATED

    Source sequence(s)
    AC025500, AK135970, BF662071
    Consensus CDS
    CCDS40623.1
    UniProtKB/Swiss-Prot
    Q9CXV1
    Related
    ENSMUSP00000000175.4, OTTMUSP00000079447, ENSMUST00000000175.5, OTTMUST00000153520
    Conserved Domains (1) summary
    cd03496
    Location:60158
    SQR_TypeC_CybS; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Eukaryotic SQRs reduce high potential quinones such as ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

    Range
    50596340..50603849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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