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0610009L18Rik RIKEN cDNA 0610009L18 gene [ Mus musculus (house mouse) ]

Gene ID: 66838, updated on 22-Oct-2024

Summary

Official Symbol
0610009L18Rikprovided by MGI
Official Full Name
RIKEN cDNA 0610009L18 geneprovided by MGI
Primary source
MGI:MGI:1914088
See related
Ensembl:ENSMUSG00000043644 AllianceGenome:MGI:1914088
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 116.1), ovary adult (RPKM 16.3) and 12 other tissues See more
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Genomic context

See 0610009L18Rik in Genome Data Viewer
Location:
11 E2; 11 84.07 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (120239504..120242016)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (120348678..120351190)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene BAH domain and coiled-coil containing 1 Neighboring gene predicted gene 11772 Neighboring gene STARR-seq mESC enhancer starr_31350 Neighboring gene STARR-positive B cell enhancer ABC_E3044 Neighboring gene STARR-positive B cell enhancer ABC_E9383 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:120172126-120172235 Neighboring gene VISTA enhancer mm1481 Neighboring gene microRNA 6935 Neighboring gene actin, gamma, cytoplasmic 1 Neighboring gene fascin actin-bundling protein 2 Neighboring gene Fanconi anemia core complex associated protein 100

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038126.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK002420, AK005967, AL669855
    Related
    ENSMUST00000143813.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    120239504..120242016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)