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Prp5 pre-mRNA processing factor 5 [ Drosophila virilis ]

Gene ID: 6633856, updated on 23-May-2024

Summary

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Gene symbol
Prp5
Gene description
pre-mRNA processing factor 5
Locus tag
Dvir_GJ17053
See related
EnsemblRapid:LOC6633856
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ17053; GJ17053-PA
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587575.1 (16538410..16543201, complement)

NW_022587575.1Genomic Context describing neighboring genes Neighboring gene WSCD family member CG9164 Neighboring gene abnormal chemosensory protein 6 Neighboring gene Protein phosphatase 1 at 13C Neighboring gene p21-activated protein kinase-interacting protein 1-like Neighboring gene uncharacterized LOC6633854 Neighboring gene skin secretory protein xP2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587575 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
Names
Dvir\GJ17053
Dvir\GJ17053-PA
dvir_GLEANR_17555
probable ATP-dependent RNA helicase DDX46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587575.1 Reference DvirRS2

    Range
    16538410..16543201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002057343.3 → XP_002057379.3  LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46

    UniProtKB/TrEMBL
    B4M7U8
    Related
    XP_002057379.3, XM_002057343.3
    Conserved Domains (2) summary
    PTZ00110
    Location:478 → 923
    PTZ00110; helicase; Provisional
    cd22473
    Location:1139 → 1241
    KH-I_DDX46; type I K homology (KH) RNA-binding domain found in DEAD box protein 46 (DDX46) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials