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LOC6625228 histone-lysine N-methyltransferase 2C [ Drosophila virilis ]

Gene ID: 6625228, updated on 14-Dec-2023

Summary

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Gene symbol
LOC6625228
Gene description
histone-lysine N-methyltransferase 2C
Locus tag
Dvir_GJ21880
See related
EnsemblRapid:LOC6625228
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ21880; GJ21880-PA
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587567.1 (14251289..14257972, complement)

NW_022587567.1Genomic Context describing neighboring genes Neighboring gene probable transaldolase Neighboring gene calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type Neighboring gene DNA ligase 1 Neighboring gene methyltransferase-like protein 9 Neighboring gene mRNA-decapping enzyme 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587567 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MLL3/4 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase 2C
Names
Dvir\GJ21880
Dvir\GJ21880-PA
dvir_GLEANR_7206

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587567.1 Reference DvirRS2

    Range
    14251289..14257972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002049929.3 → XP_002049965.1  histone-lysine N-methyltransferase 2C

    See identical proteins and their annotated locations for XP_002049965.1

    UniProtKB/TrEMBL
    B4LNY9
    Related
    XP_002049965.1, XM_002049929.3
    Conserved Domains (7) summary
    smart00398
    Location:1147 → 1194
    HMG; high mobility group
    cd15509
    Location:208 → 253
    PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
    cd15512
    Location:532 → 580
    PHD4_KMT2C_like; PHD finger 4 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD domain 3 found in KMT2D
    cd15513
    Location:582 → 627
    PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
    cd15514
    Location:659 → 709
    PHD6_KMT2C_like; PHD finger 6 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 5 found in KMT2D
    cl02608
    Location:605 → 652
    BAH; BAH, or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in ...
    cl22851
    Location:114 → 194
    PHD_SF; PHD finger superfamily
Nucleotide Protein Strain
Heading Accession and Version

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