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LOC6568529 STAM-binding protein-like A [ Drosophila grimshawi ]

Gene ID: 6568529, updated on 10-May-2024

Summary

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Gene symbol
LOC6568529
Gene description
STAM-binding protein-like A
Locus tag
Dgri_GH17430
See related
EnsemblRapid:LOC6568529
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH17430; GH17430-PA
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (22632063..22634631, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961680.1 (4170794..4173057)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene DUF1676 domain-containing protein Osi23 Neighboring gene calcium-binding mitochondrial carrier protein Aralar1 Neighboring gene neutral ceramidase Neighboring gene prolyl 4-hydroxylase subunit alpha-1 Neighboring gene transcription factor SPT20 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
STAM-binding protein-like A
Names
Dgri\GH17430
Dgri\GH17430-PA
dgri_GLEANR_1840

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    22632063..22634631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001994758.3 → XP_001994794.1  STAM-binding protein-like A

    See identical proteins and their annotated locations for XP_001994794.1

    UniProtKB/TrEMBL
    B4JVA3
    Related
    XP_001994794.1, XM_001994758.3
    Conserved Domains (2) summary
    cd08066
    Location:246 → 418
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    pfam08969
    Location:17 → 119
    USP8_dimer; USP8 dimerization domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials