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FOXD4L5 forkhead box D4 like 5 [ Homo sapiens (human) ]

Gene ID: 653427, updated on 13-May-2022

Summary

Official Symbol
FOXD4L5provided by HGNC
Official Full Name
forkhead box D4 like 5provided by HGNC
Primary source
HGNC:HGNC:18522
See related
Ensembl:ENSG00000204779 AllianceGenome:HGNC:18522
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bA15J10.2
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of chromatin. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See FOXD4L5 in Genome Data Viewer
Location:
9q21.11
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (65282101..65285209, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (77031350..77033809)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (70175707..70178815, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112268045 Neighboring gene immunoglobulin kappa variable 1/OR9-1 (pseudogene) Neighboring gene Zn regulated GTPase metalloprotein activator 1D, pseudogene Neighboring gene uncharacterized LOC105379444

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in chromatin ISA
Inferred from Sequence Alignment
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
forkhead box protein D4-like 5
Names
FOXD4-like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126334.1NP_001119806.1  forkhead box protein D4-like 5

    See identical proteins and their annotated locations for NP_001119806.1

    Status: VALIDATED

    Source sequence(s)
    AL512605
    Consensus CDS
    CCDS47977.1
    UniProtKB/Swiss-Prot
    Q5VV16
    Related
    ENSP00000366637.1, ENST00000377420.1
    Conserved Domains (1) summary
    pfam00250
    Location:108194
    Forkhead; Forkhead domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    65282101..65285209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    77031350..77033809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)