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ANKRD33B ankyrin repeat domain 33B [ Homo sapiens (human) ]

Gene ID: 651746, updated on 1-Jun-2020

Summary

Official Symbol
ANKRD33Bprovided by HGNC
Official Full Name
ankyrin repeat domain 33Bprovided by HGNC
Primary source
HGNC:HGNC:35240
See related
Ensembl:ENSG00000164236
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in brain (RPKM 5.5), kidney (RPKM 5.1) and 20 other tissues See more
Orthologs

Genomic context

See ANKRD33B in Genome Data Viewer
Location:
5p15.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (10564070..10657816)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (10564435..10657928)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2212 Neighboring gene long intergenic non-protein coding RNA 2213 Neighboring gene Sharpr-MPRA regulatory region 12583 Neighboring gene intersectin 1 (SH3 domain protein) pseudogene Neighboring gene death associated protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
ankyrin repeat domain-containing protein 33B
Names
Ankyrin repeat domain-containing protein LOC651746

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164440.2NP_001157912.1  ankyrin repeat domain-containing protein 33B

    See identical proteins and their annotated locations for NP_001157912.1

    Status: VALIDATED

    Source sequence(s)
    AC106760, AC112200
    Consensus CDS
    CCDS47191.1
    UniProtKB/Swiss-Prot
    A6NCL7
    Related
    ENSP00000296657.4, ENST00000296657.7
    Conserved Domains (4) summary
    cd00204
    Location:116243
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:125220
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:85140
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:120152
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    10564070..10657816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005248344.3XP_005248401.1  ankyrin repeat domain-containing protein 33B isoform X1

    See identical proteins and their annotated locations for XP_005248401.1

    Conserved Domains (2) summary
    cd00204
    Location:155
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:157
    Ank_2; Ankyrin repeats (3 copies)
  2. XM_005248343.4XP_005248400.1  ankyrin repeat domain-containing protein 33B isoform X1

    See identical proteins and their annotated locations for XP_005248400.1

    Conserved Domains (2) summary
    cd00204
    Location:155
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:157
    Ank_2; Ankyrin repeats (3 copies)
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