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DLGAP1-AS1 DLGAP1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 649446, updated on 1-Jun-2020

Summary

Official Symbol
DLGAP1-AS1provided by HGNC
Official Full Name
DLGAP1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:31676
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HsT914
Expression
Ubiquitous expression in adrenal (RPKM 8.7), appendix (RPKM 5.5) and 23 other tissues See more

Genomic context

See DLGAP1-AS1 in Genome Data Viewer
Location:
18p11.31
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (3594114..3597379)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (3594112..3597377)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene DLG associated protein 1 Neighboring gene zinc finger protein 592 pseudogene Neighboring gene RNA, 7SL, cytoplasmic 39, pseudogene Neighboring gene DLGAP1 antisense RNA 2 Neighboring gene Sharpr-MPRA regulatory region 10669 Neighboring gene uncharacterized LOC105371967

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • DLGAP1 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ35776

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024101.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI275162, AK093095, BC137437

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    3594114..3597379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039796.1: Suppressed sequence

    Description
    NM_001039796.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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