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C3orf84 chromosome 3 open reading frame 84 [ Homo sapiens (human) ]

Gene ID: 646498, updated on 23-Nov-2021

Summary

Official Symbol
C3orf84provided by HGNC
Official Full Name
chromosome 3 open reading frame 84provided by HGNC
Primary source
HGNC:HGNC:44666
See related
Ensembl:ENSG00000236980
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.1) See more
Orthologs
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Genomic context

See C3orf84 in Genome Data Viewer
Location:
3p21.31
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (49177539..49192684, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (49215067..49229291, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 71 Neighboring gene kelch domain containing 8B Neighboring gene interactor of HORMAD1 1 Neighboring gene chromosome 3 open reading frame 62 Neighboring gene microRNA 4271

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C3orf84

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080528.3NP_001073997.2  uncharacterized protein C3orf84

    See identical proteins and their annotated locations for NP_001073997.2

    Status: VALIDATED

    Source sequence(s)
    AC135506
    Consensus CDS
    CCDS58831.1
    UniProtKB/Swiss-Prot
    H3BNL1
    Related
    ENSP00000454903.1, ENST00000545770.7
    Conserved Domains (1) summary
    pfam15115
    Location:7116
    HDNR; Domain of unknown function with conserved HDNR motif

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    49177539..49192684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011534017.2XP_011532319.1  uncharacterized protein C3orf84 isoform X2

    Conserved Domains (1) summary
    pfam15115
    Location:10111
    HDNR; Domain of unknown function with conserved HDNR motif
  2. XM_011534018.2XP_011532320.1  uncharacterized protein C3orf84 isoform X3

    Conserved Domains (1) summary
    pfam15115
    Location:766
    HDNR; Domain of unknown function with conserved HDNR motif
  3. XM_011534015.2XP_011532317.1  uncharacterized protein C3orf84 isoform X1

    UniProtKB/TrEMBL
    H3BQU4
    Related
    ENSP00000455944.1, ENST00000432035.2
    Conserved Domains (1) summary
    pfam15115
    Location:7117
    HDNR; Domain of unknown function with conserved HDNR motif
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