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SLC35G6 solute carrier family 35 member G6 [ Homo sapiens (human) ]

Gene ID: 643664, updated on 22-Sep-2022

Summary

Official Symbol
SLC35G6provided by HGNC
Official Full Name
solute carrier family 35 member G6provided by HGNC
Primary source
HGNC:HGNC:31351
See related
Ensembl:ENSG00000259224 AllianceGenome:HGNC:31351
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AMAC1L3; TMEM21B
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis (RPKM 1.7) See more
Orthologs
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Genomic context

See SLC35G6 in Genome Data Viewer
Location:
17p13.1
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (7481446..7483496)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (7385492..7387542)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (7384765..7386815)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 11 Neighboring gene cholinergic receptor nicotinic beta 1 subunit Neighboring gene zinc finger and BTB domain containing 4 Neighboring gene RNA polymerase II subunit A Neighboring gene TNFSF12-TNFSF13 readthrough Neighboring gene TNF superfamily member 12

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
solute carrier family 35 member G6
Names
acyl-malonyl condensing enzyme 1-like 3
acyl-malonyl-condensing enzyme 1-like protein 3
protein AMAC1L3
transmembrane protein 21B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102614.2NP_001096084.1  solute carrier family 35 member G6

    See identical proteins and their annotated locations for NP_001096084.1

    Status: VALIDATED

    Source sequence(s)
    AC113189
    Consensus CDS
    CCDS45603.1
    UniProtKB/Swiss-Prot
    P0C7Q6
    Related
    ENSP00000396523.2, ENST00000412468.4
    Conserved Domains (2) summary
    TIGR00950
    Location:62319
    2A78; Carboxylate/Amino Acid/Amine Transporter
    pfam00892
    Location:221324
    EamA; EamA-like transporter family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    7481446..7483496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047436533.1XP_047292489.1  solute carrier family 35 member G6 isoform X1

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_016107299.1 Reference GRCh38.p14 PATCHES

    Range
    101903..103953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    7385492..7387542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)