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LOC642484 uncharacterized LOC642484 [ Homo sapiens (human) ]

Gene ID: 642484, updated on 23-Nov-2021

Summary

Gene symbol
LOC642484
Gene description
uncharacterized LOC642484
See related
Ensembl:ENSG00000206129
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC642484 in Genome Data Viewer
Location:
18q21.2
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (56003613..56191262, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (53670844..53858493, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372131 Neighboring gene long intergenic non-protein coding RNA 1416 Neighboring gene uncharacterized LOC107985164 Neighboring gene long intergenic non-protein coding RNA 1905 Neighboring gene long intergenic non-protein coding RNA 1539 Neighboring gene uncharacterized LOC105372132 Neighboring gene uncharacterized LOC105372135 Neighboring gene thioredoxin like 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Common human genetic variants and HIV-1 susceptibility: a genome-wide survey in a homogeneous African population.
EBI GWAS Catalog

General gene information

Markers

Clone Names

  • FLJ45743

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_148972.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009271, AK127645
    Related
    ENST00000382897.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    56003613..56191262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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