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FAM204A family with sequence similarity 204 member A [ Homo sapiens (human) ]

Gene ID: 63877, updated on 23-Nov-2021

Summary

Official Symbol
FAM204Aprovided by HGNC
Official Full Name
family with sequence similarity 204 member Aprovided by HGNC
Primary source
HGNC:HGNC:25794
See related
Ensembl:ENSG00000165669
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C10orf84; bA319I23.1
Expression
Ubiquitous expression in testis (RPKM 6.9), brain (RPKM 5.1) and 25 other tissues See more
Orthologs
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Genomic context

See FAM204A in Genome Data Viewer
Location:
10q26.11
Exon count:
11
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (118297925..118342325, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (120057437..120101836, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene cancer susceptibility 2 Neighboring gene Sharpr-MPRA regulatory region 3281 Neighboring gene long intergenic non-protein coding RNA 2944 Neighboring gene VISTA enhancer hs672 Neighboring gene long intergenic non-protein coding RNA 867 Neighboring gene Sharpr-MPRA regulatory region 4791

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ13188

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134672.2NP_001128144.1  protein FAM204A

    See identical proteins and their annotated locations for NP_001128144.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR when compared to variant 1.
    Source sequence(s)
    AL365498, BC023577, BM837313, DA168924
    Consensus CDS
    CCDS7605.1
    UniProtKB/Swiss-Prot
    Q9H8W3
    Related
    ENSP00000358170.4, ENST00000369172.8
  2. NM_022063.3NP_071346.1  protein FAM204A

    See identical proteins and their annotated locations for NP_071346.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL365498, BC023577, DA168924
    Consensus CDS
    CCDS7605.1
    UniProtKB/Swiss-Prot
    Q9H8W3
    Related
    ENSP00000358183.4, ENST00000369183.9

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    118297925..118342325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005270024.1XP_005270081.1  protein FAM204A isoform X1

    See identical proteins and their annotated locations for XP_005270081.1

RNA

  1. XR_001747176.2 RNA Sequence

  2. XR_001747175.1 RNA Sequence

  3. XR_945795.1 RNA Sequence

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