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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029558.2 RefSeqGene
- Range
-
5000..279793
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001363702.1 → NP_001350631.1 reticulon-1 isoform D
Status: REVIEWED
- Source sequence(s)
-
AL121694, BC111694
- Consensus CDS
-
CCDS86396.1
- UniProtKB/TrEMBL
- A8MT72, B7Z4K5
- Related
- ENSP00000378525.1, ENST00000395090.5
- Conserved Domains (1) summary
-
- pfam02453
Location:8 → 170
- Reticulon
-
NM_021136.3 → NP_066959.1 reticulon-1 isoform A
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (A, also known as NSP-A).
- Source sequence(s)
-
AL121694, AL133299, AL139194
- Consensus CDS
-
CCDS9740.1
- UniProtKB/Swiss-Prot
- Q16799, Q16800, Q16801, Q5BKZ4, Q9BQ59
- UniProtKB/TrEMBL
-
Q2NKQ5
- Related
- ENSP00000267484.5, ENST00000267484.10
- Conserved Domains (1) summary
-
- pfam02453
Location:591 → 753
- Reticulon; Reticulon
-
NM_206852.3 → NP_996734.1 reticulon-1 isoform C
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (C, also known as NSP-C) contains a distinct N-terminus and is shorter than isoform A.
- Source sequence(s)
-
AL121694
- Consensus CDS
-
CCDS9741.1
- UniProtKB/TrEMBL
- A8K3B9, Q6IAX4
- Related
- ENSP00000340716.4, ENST00000342503.8
- Conserved Domains (1) summary
-
- pfam02453
Location:23 → 185
- Reticulon
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001243115.1: Suppressed sequence
- Description
- NM_001243115.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_206857.1: Suppressed sequence
- Description
- NM_206857.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein, and the transcript appears to retain intronic sequence at its 5' end.