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FOA43_003173 uncharacterized protein [ Brettanomyces nanus ]

Gene ID: 62196574, updated on 7-Dec-2023

Summary

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Gene symbol
FOA43_003173
Gene description
uncharacterized protein
Locus tag
FOA43_003173
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brettanomyces nanus (strain: CBS 1945, culture-collection: AWRI:2847, type-material: type material of Eeniella nana)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Brettanomyces
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_052376.1 (1051102..1051822)

Chromosome 3 - NC_052376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052376.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion with Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ER to Golgi transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_038779376.1
  • BUSCO:EOG0934430H

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_052376.1 Reference assembly

    Range
    1051102..1051822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038923448.1 → XP_038779376.1  uncharacterized protein FOA43_003173 [Brettanomyces nanus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A875S256
    Conserved Domains (1) summary
    COG5143
    Location:1 → 200
    SNC1; Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]
Nucleotide Protein
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Molecular Biology Databases