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FOA43_001987 uncharacterized protein [ Brettanomyces nanus ]

Gene ID: 62195388, updated on 7-Dec-2023

Summary

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Gene symbol
FOA43_001987
Gene description
uncharacterized protein
Locus tag
FOA43_001987
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brettanomyces nanus (strain: CBS 1945, culture-collection: AWRI:2847, type-material: type material of Eeniella nana)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Brettanomyces
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_052375.1 (79932..80906)

Chromosome 2 - NC_052375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052375.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UV-damage excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ERCC4-ERCC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleotide-excision repair factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_038778220.1
  • BUSCO:EOG09343OS1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_052375.1 Reference assembly

    Range
    79932..80906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038922292.1 → XP_038778220.1  uncharacterized protein FOA43_001987 [Brettanomyces nanus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A875S2T3
    Conserved Domains (2) summary
    pfam03834
    Location:106 → 225
    Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
    cl40629
    Location:259 → 313
    DisA-linker; DisA bacterial checkpoint controller linker region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases