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FOA43_000080 uncharacterized protein [ Brettanomyces nanus ]

Gene ID: 62193481, updated on 7-Dec-2023

Summary

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Gene symbol
FOA43_000080
Gene description
uncharacterized protein
Locus tag
FOA43_000080
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brettanomyces nanus (strain: CBS 1945, culture-collection: AWRI:2847, type-material: type material of Eeniella nana)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Brettanomyces
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_052374.1 (165166..165810, complement)

Chromosome 1 - NC_052374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Leu Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052374.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in spliceosomal complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_038776344.1
  • BUSCO:EOG093449Q6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_052374.1 Reference assembly

    Range
    165166..165810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038920416.1 → XP_038776344.1  uncharacterized protein FOA43_000080 [Brettanomyces nanus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A875RYM5
    Conserved Domains (1) summary
    COG5246
    Location:1 → 213
    PRP11; Splicing factor 3a, subunit 2 [RNA processing and modification]
Nucleotide Protein
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Molecular Biology Databases