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1700010L04Rik RIKEN cDNA 1700010L04 gene [ Mus musculus (house mouse) ]

Gene ID: 619808, updated on 17-Aug-2024

Summary

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Official Symbol
1700010L04Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700010L04 geneprovided by MGI
Primary source
MGI:MGI:1916583
See related
AllianceGenome:MGI:1916583
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See 1700010L04Rik in Genome Data Viewer
Location:
7 D3; 7 47.35 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (82499585..82510783)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (82851599..82861575)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene elongation factor like GTPase 1 Neighboring gene RIKEN cDNA 4933406J10 gene Neighboring gene STARR-seq mESC enhancer starr_19388 Neighboring gene predicted gene, 29796 Neighboring gene STARR-seq mESC enhancer starr_19392 Neighboring gene STARR-seq mESC enhancer starr_19393 Neighboring gene predicted gene, 36584 Neighboring gene STARR-positive B cell enhancer ABC_E10448 Neighboring gene mex3 RNA binding family member B Neighboring gene RIKEN cDNA 4933430H16 gene Neighboring gene predicted gene, 45992

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Thompson CL, et al. Neuron, 2014 Jul 16. PMID 24952961, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    82499585..82510783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_378283.5 RNA Sequence

  2. XR_105177.6 RNA Sequence

  3. XR_004934368.1 RNA Sequence

  4. XR_378291.4 RNA Sequence

  5. XR_378287.4 RNA Sequence

  6. XR_378289.4 RNA Sequence

  7. XR_378290.4 RNA Sequence

  8. XR_378288.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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