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LACBIDRAFT_183098 uncharacterized protein [ Laccaria bicolor S238N-H82 ]

Gene ID: 6072737, updated on 28-Dec-2023

Summary

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Gene symbol
LACBIDRAFT_183098
Gene description
uncharacterized protein
Locus tag
LACBIDRAFT_183098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Laccaria bicolor S238N-H82 (strain: S238N-H82)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
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Genomic context

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See LACBIDRAFT_183098 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_001889875.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tubulin alpha Neighboring gene uncharacterized protein Neighboring gene tubulin alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001889875.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001889875.1 Reference assembly

    Range
    1437868..1440704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001876552.1 → XP_001876587.1  uncharacterized protein LACBIDRAFT_183098 [Laccaria bicolor S238N-H82]

    See identical proteins and their annotated locations for XP_001876587.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0CXU5
    Conserved Domains (5) summary
    PLN02859
    Location:13 → 828
    PLN02859; glutamine-tRNA ligase
    cd00807
    Location:251 → 564
    GlnRS_core; catalytic core domain of glutaminyl-tRNA synthetase
    pfam03950
    Location:563 → 724
    tRNA-synt_1c_C; tRNA synthetases class I (E and Q), anti-codon binding domain
    pfam04557
    Location:169 → 254
    tRNA_synt_1c_R2; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
    pfam04558
    Location:14 → 166
    tRNA_synt_1c_R1; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
Nucleotide Protein
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