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TRP1 bifunctional tryptophan synthase TRP1 [ Laccaria bicolor S238N-H82 ]

Gene ID: 6070455, updated on 28-Dec-2023

Summary

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Gene symbol
TRP1
Gene description
bifunctional tryptophan synthase TRP1
Locus tag
LACBIDRAFT_187542
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Laccaria bicolor S238N-H82 (strain: S238N-H82)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria
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Genomic context

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See TRP1 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
12

NW_001889873.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001889873.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Martin F, et al. Nature, 2008 Mar 6. PMID 18322534

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tryptophan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional tryptophan synthase TRP1
XP_001874776.1
  • bifunctional tryptophan synthase TRP1; Tryptophan synthase is a bifunctional pyridoxal-5'-phosphate (PLP)-dependent tetrameric (2 alpha and 2 beta subunits) enzyme that catalyzes the last 2 steps of the L-tryptophan synthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001889873.1 Reference assembly

    Range
    2310466..2313147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001874741.1 → XP_001874776.1  bifunctional tryptophan synthase TRP1 [Laccaria bicolor S238N-H82]

    See identical proteins and their annotated locations for XP_001874776.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0CS16
    Conserved Domains (3) summary
    PRK04346
    Location:303 → 685
    PRK04346; tryptophan synthase subunit beta; Validated
    PRK13111
    Location:6 → 264
    trpA; tryptophan synthase subunit alpha; Provisional
    pfam00291
    Location:349 → 672
    PALP; Pyridoxal-phosphate dependent enzyme
Nucleotide Protein
Heading Accession and Version

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