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OE_RS05205 deoxyribodipyrimidine photo-lyase [ Halobacterium salinarum R1 ]

Gene ID: 5954311, updated on 7-Feb-2024

Summary

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Gene symbol
OE_RS05205
Gene description
deoxyribodipyrimidine photo-lyase
Locus tag
OE_RS05205
Gene type
protein coding
Organism
Halobacterium salinarum R1 (strain: DSM 671 = R1)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
OE2907R; OE_2907R
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Genomic context

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Sequence:
NC_010364.1 (987384..988829, complement)

NC_010364.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene superoxide dismutase Neighboring gene hotdog fold thioesterase Neighboring gene sulfatase-like hydrolase/transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010364.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DNA repair by photolyases. Kavakli IH, et al. Adv Protein Chem Struct Biol, 2019. PMID 30798929
  2. Evolution of Proteins of the DNA Photolyase/Cryptochrome Family. Vechtomova YL, et al. Biochemistry (Mosc), 2020 Jan. PMID 32087057
  3. The cryptochrome-photolyase protein family in diatoms. König S, et al. J Plant Physiol, 2017 Oct. PMID 28720252
  4. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
deoxyribodipyrimidine photo-lyase
WP_012289312.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010364.1 Reference assembly

    Range
    987384..988829 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012289312.1 deoxyribodipyrimidine photo-lyase [Halobacterium salinarum]

    See identical proteins and their annotated locations for WP_012289312.1

    UniProtKB/Swiss-Prot
    P20377, Q9HQ46
    UniProtKB/TrEMBL
    A0A4D6GU91, A0A510N6M8, A0A841H7Q1, B0R5D6
    Conserved Domains (1) summary
    COG0415
    Location:1 → 478
    PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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