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OE_RS09570 RNA-binding domain-containing protein [ Halobacterium salinarum R1 ]

Gene ID: 5953393, updated on 14-Apr-2023

Summary

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Gene symbol
OE_RS09570
Gene description
RNA-binding domain-containing protein
Locus tag
OE_RS09570
Gene type
protein coding
Organism
Halobacterium salinarum R1 (strain: DSM 671 = R1)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
OE4444F; OE_4444F
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Genomic context

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Sequence:
NC_010364.1 (1827571..1827987)

NC_010364.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Arg Neighboring gene AAA family ATPase Neighboring gene hypothetical protein Neighboring gene magnesium transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010364.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function. Rao KN, et al. PLoS One, 2008. PMID 19079550, Free PMC Article
  2. Crystal structure of the DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3. Miyazono K, et al. Proteins, 2009 Jan. PMID 18831045
  3. Expression, purification and structural analysis of the Pyrococcus abyssi RNA binding protein PAB1135. Luz JS, et al. BMC Res Notes, 2010 Apr 9. PMID 20380716, Free PMC Article
  4. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA-binding domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010364.1 Reference assembly

    Range
    1827571..1827987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010903834.1 MULTISPECIES: RNA-binding domain-containing protein [Halobacterium]

    See identical proteins and their annotated locations for WP_010903834.1

    UniProtKB/TrEMBL
    A0A4D6GQ25, A0A841H9T2, A0A895A9I2, A0A895ALY6, B0R7W9, Q9HMN9
    Conserved Domains (1) summary
    COG1931
    Location:7 → 138
    COG1931; Predicted RNA binding protein with dsRBD fold, UPF0201 family [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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