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nova2 neuro-oncological ventral antigen 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 595078, updated on 17-Aug-2024

Summary

Official Symbol
nova2provided by Xenbase
Official Full Name
neuro-oncological ventral antigen 2provided by Xenbase
Primary source
Xenbase:XB-GENE-489037
See related
Ensembl:ENSXETG00000019101
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
anova; nova3
Orthologs
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Genomic context

Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (70941074..70954934)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (49832421..49846236)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101730376 Neighboring gene exocyst complex component 3-like 2 Neighboring gene Myb-related transcription factor, partner of profilin Neighboring gene uncharacterized LOC116406531 Neighboring gene symplekin scaffold protein

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030515.1NP_001025686.1  RNA-binding protein Nova-2

    See identical proteins and their annotated locations for NP_001025686.1

    Status: PROVISIONAL

    Source sequence(s)
    BC093475
    UniProtKB/TrEMBL
    F7ACQ0, Q566K8
    Related
    ENSXETP00000041393.4, ENSXETT00000041393.5
    Conserved Domains (2) summary
    cd00105
    Location:329394
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd02396
    Location:135198
    PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    70941074..70954934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)