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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001018039.1 → NP_001018049.1 scm-like with four MBT domains protein 2 isoform 1
See identical proteins and their annotated locations for NP_001018049.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
- Source sequence(s)
-
AB046837, AL138771, AL590095
- Consensus CDS
-
CCDS31138.1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
- Related
- ENSP00000355109.4, ENST00000361972.8
- Conserved Domains (3) summary
-
- cd09581
Location:810 → 894
- SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
- smart00561
Location:48 → 144
- MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
- pfam12140
Location:528 → 643
- SLED; SLED domain
-
NM_001029880.3 → NP_001025051.1 scm-like with four MBT domains protein 2 isoform 1
See identical proteins and their annotated locations for NP_001025051.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
- Source sequence(s)
-
AB046837, AL138771, AL139125, AL590095, DA152101
- Consensus CDS
-
CCDS31138.1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
- Related
- ENSP00000507767.1, ENST00000683762.1
- Conserved Domains (3) summary
-
- cd09581
Location:810 → 894
- SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
- smart00561
Location:48 → 144
- MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
- pfam12140
Location:528 → 643
- SLED; SLED domain
-
NM_001387889.1 → NP_001374818.1 scm-like with four MBT domains protein 2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AL138771, AL139125, AL158046, AL590095
- Consensus CDS
-
CCDS31138.1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
- Related
- ENSP00000380353.1, ENST00000397167.6
- Conserved Domains (3) summary
-
- cd09581
Location:810 → 894
- SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
- smart00561
Location:48 → 144
- MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
- pfam12140
Location:528 → 643
- SLED; SLED domain
-
NM_001387890.1 → NP_001374819.1 scm-like with four MBT domains protein 2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL138771, AL139125, AL158046, AL590095
- UniProtKB/TrEMBL
-
A0A804HLD5
- Conserved Domains (3) summary
-
- cd09581
Location:558 → 642
- SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
- smart00561
Location:132 → 225
- MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
- pfam12140
Location:276 → 391
- SLED; SLED domain
-
NM_001387891.1 → NP_001374820.1 scm-like with four MBT domains protein 2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AL138771, AL139125, AL158046, AL590095
- Consensus CDS
-
CCDS31138.1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
- Conserved Domains (3) summary
-
- cd09581
Location:810 → 894
- SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
- smart00561
Location:48 → 144
- MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
- pfam12140
Location:528 → 643
- SLED; SLED domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
7158624..7411490 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047425568.1 → XP_047281524.1 scm-like with four MBT domains protein 2 isoform X1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
-
XM_047425567.1 → XP_047281523.1 scm-like with four MBT domains protein 2 isoform X1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
-
XM_047425570.1 → XP_047281526.1 scm-like with four MBT domains protein 2 isoform X3
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_006717490.2 → XP_006717553.1 scm-like with four MBT domains protein 2 isoform X2
- UniProtKB/TrEMBL
-
A0A804HLD5
- Conserved Domains (4) summary
-
- cd09581
Location:641 → 725
- SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
- smart00454
Location:652 → 716
- SAM; Sterile alpha motif
- smart00561
Location:215 → 308
- MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
- pfam12140
Location:359 → 474
- DUF3588; Protein of unknown function (DUF3588)
-
XM_047425569.1 → XP_047281525.1 scm-like with four MBT domains protein 2 isoform X2
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_047425573.1 → XP_047281529.1 scm-like with four MBT domains protein 2 isoform X3
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_047425571.1 → XP_047281527.1 scm-like with four MBT domains protein 2 isoform X4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
7158401..7411442 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054366434.1 → XP_054222409.1 scm-like with four MBT domains protein 2 isoform X1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
-
XM_054366433.1 → XP_054222408.1 scm-like with four MBT domains protein 2 isoform X1
- UniProtKB/Swiss-Prot
- A7MD09, Q5VUG0, Q9HCF5
- UniProtKB/TrEMBL
-
A0A669KBL2
-
XM_054366437.1 → XP_054222412.1 scm-like with four MBT domains protein 2 isoform X3
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_054366435.1 → XP_054222410.1 scm-like with four MBT domains protein 2 isoform X2
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_054366436.1 → XP_054222411.1 scm-like with four MBT domains protein 2 isoform X2
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_054366439.1 → XP_054222414.1 scm-like with four MBT domains protein 2 isoform X3
- UniProtKB/TrEMBL
-
A0A804HLD5
-
XM_054366438.1 → XP_054222413.1 scm-like with four MBT domains protein 2 isoform X4
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_020953.1: Suppressed sequence
- Description
- NM_020953.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.