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LOC575057 ubiquitin carboxyl-terminal hydrolase 7 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 575057, updated on 14-Dec-2023

Summary

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Gene symbol
LOC575057
Gene description
ubiquitin carboxyl-terminal hydrolase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145570.1 (606113..656832)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577236.1 (409822..462827)

NW_022145570.1Genomic Context describing neighboring genes Neighboring gene annexin A7 Neighboring gene UPF0472 protein C16orf72 homolog Neighboring gene uncharacterized LOC115929553 Neighboring gene dehydrogenase/reductase SDR family protein 7-like Neighboring gene transmembrane protein 11-B, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145570.1 Reference Spur_5.0 Primary Assembly

    Range
    606113..656832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030998815.1 → XP_030854675.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X1

    UniProtKB/TrEMBL
    A0A7M7PT32
    Conserved Domains (1) summary
    COG5077
    Location:58 → 1066
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  2. XM_030998831.1 → XP_030854691.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    UniProtKB/TrEMBL
    A0A7M7T561
    Conserved Domains (1) summary
    COG5077
    Location:58 → 1064
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  3. XM_030998822.1 → XP_030854682.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    UniProtKB/TrEMBL
    A0A7M7SYH6
    Conserved Domains (1) summary
    COG5077
    Location:58 → 1066
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  4. XM_030998838.1 → XP_030854698.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X4

    UniProtKB/TrEMBL
    A0A7M7PRL3
    Conserved Domains (1) summary
    COG5077
    Location:58 → 1063
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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